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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9650623 chr8:10309570 C/T SGK223 chr8:8175258-8244008:- 0.38 6.1 2.15E-9 Box Plot
THCA rs9650648 chr8:10120879 C/T SGK223 chr8:8175258-8244008:- 0.36 5.94 5.64E-9 Box Plot
THCA rs9650649 chr8:10121022 C/T SGK223 chr8:8175258-8244008:- 0.36 5.92 6.21E-9 Box Plot
THCA rs9650650 chr8:10247976 C/T SGK223 chr8:8175258-8244008:- -0.38 -7.04 6.88E-12 Box Plot
THCA rs9650651 chr8:10267540 C/A SGK223 chr8:8175258-8244008:- -0.33 -6.43 3.1E-10 Box Plot
THCA rs9650661 chr8:11427133 G/T SGK223 chr8:8175258-8244008:- 0.42 7.97 1.21E-14 Box Plot
THCA rs9651571 chr11:49191163 C/T FOLH1B chr11:89372395-89431886:+ -0.38 -6.61 1.02E-10 Box Plot
THCA rs9652288 chr14:66800242 A/T ATP6V1D chr14:67761088-67826982:- 0.43 7.54 2.45E-13 Box Plot
THCA rs9652865 chr17:63874024 G/A BPGM chr7:134331560-134364565:+ 0.34 6.07 2.62E-9 Box Plot
THCA rs965513 chr9:100556109 A/G BMPR1A chr10:88516358-88692595:+ -0.24 -6.3 6.58E-10 Box Plot
THCA rs965513 chr9:100556109 A/G CLDN2 chrX:106143394-106174091:+ 0.26 6.02 3.46E-9 Box Plot
THCA rs965513 chr9:100556109 A/G EML5 chr14:89078775-89259096:- 0.3 6.88 1.9E-11 Box Plot
THCA rs965513 chr9:100556109 A/G EPDR1 chr7:37723446-37991543:+ 0.32 7.17 2.86E-12 Box Plot
THCA rs965513 chr9:100556109 A/G GGT5 chr22:24615622-24641110:- 0.26 5.98 4.48E-9 Box Plot
THCA rs965513 chr9:100556109 A/G LRRC42 chr1:54411750-54433841:+ -0.23 -5.96 4.79E-9 Box Plot